Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------MMSAS--------WLRHRVS---ERGLIA--TAEQLWADS-FRLALVAAHDDGD----SLRVVYLFLAGYPDRRVEL---EYVVPADNPEIRSL-----------AYLSFPA----GRFE---------------REMADLYGIRPVGHPKPRRLVRHAHWPDWHPMRTDAGPAPEFTDTGAFPFLAVEGPGVYEIPVGPVHAGLIEPGHFRFSVAGETIVRLKARLWFVHRGIEKLFHGRP--ATAAVDLAERISGDTSAAHALAHSLAIEDALGIELPHEVHR-LRALIVEL-------ERLYNHAADLGALANDVGYSLANAHAQRIRENLLRRNAAVT-----GHRLLRGAIRA------------------GGVALRALPDTDELAALAVDL--AEVATLTLANSVVYDRFAGTAVLHPDDASALGCLGYVARASG----LRSDARVEHPTIVLPI------------TEIGAPDGDVLARYTVRR-------------------DEFAASAALAQHIVESHTGP--------IEYAATLHPV----------GAPSSGIGIVEGWRGTIVHRV------EIDVDGRITRAKVVDPSWFNWPALPVA--MADTIVP-----DFPLANKSFNQSYAGNDL-------------------- |
| 3WAI Chain:A ((-1-868)) | MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKP-FVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNKQWYDALTWMRENTPDGEKYDEYPFETYGVISWWDYGHWIEAVAHRMPIANPFQAGIGNKYNNVPGASSFFTAENESYAEFVAEKLNVKYVVSDIEMETGKYYAMAVWAEGDLPLAEKYYGGYFYYSPTGTFGYANSQWDIPLNSIIIPLRIPSELYYSTMEAKLHLFDGSGLSHYRMIYESDYPAEWKSYSSQVNLNNESQVLQTALYEAVMRARYGVSPTMGTQEVLYKYAYTQLYEKKMGIPVKIAPSGYVKIFERVKGAVVTGKVSANVTEVSVNATIKTNQ--NRTFEYWQTVEVKNGTYTVVLPYSHNSDYPVKPITPYHIKAGNVVKEITIYESQVQNGEIIQLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116473 for 3323 contacts (-35.1/contact) +
2D Compatibility (PS) -52577 + (NN) -24710 + (LL) 576
1D Compatibility (HY) -12000 + (ID) 4500
Total energy: -209684.0 ( -63.10 by residue)
QMean score : 0.137
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