Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAILRGRAPLRLGLGGGGTDVEPYSSQFGGRILSVTIDKYAYAFAERGTGDEIAFRSPDRDRAGQASIDDLASL-EEDFPLHVAVYRRVIAEFNGGTPFPLQLATQVDAPPGSGLGSSSALVVAMLLTTCALIGSSPGPYELARLAWEIERVDLGMAGGWQDHYAAAFG---GFNFMESRPNGEVVVNPLRIRREVIAELEASLLLYFGGVSRLSSE--VIAD------QQRNVV-------------ERDADALAATH---SICAEALEMKDLLVVGDIPGFADSLLRGWQAKKRTSTRISNPAIEHAYQVAQSSGMVAGKVSGAGGGGFLMMIVDPRRRIEVARSLERECGGSVAPCLFTKGGAVTWHIPESTAPVRRGVADAVASALGNAGILLCAGCVLATSHSTWRVPV |
2CZ9 Chain:A ((1-327)) | --MIKVKSPGRVNLIGEHTDY------TYGYVMPMAINLYTKIEAEKHG--EVILYSEHFGEERKFSLNDL-RKENSWIDYVKGIFWVLKES-DYEV-GGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHT---LDYEYIPFPK------DVSILVFYTGVR----SSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNY-EVSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKEDAETIGEEILR---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156481 for 2511 contacts (-62.3/contact) +
2D Compatibility (PS) -32379 + (NN) -19750 + (LL) 5028
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -218882.0 ( -87.17 by residue)
QMean score : 0.479
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