Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
3IR3 Chain:A ((14-143))
-------MHIK--VGDRAE--LRRAFTQTDVATFSELTGDVNPLHLNEDF--------TIVHGVLINGLISALLGTK--M-P-GPGCVFLSQEISFPAPLYIGEVVLASAEVKKLKRF---IAIIAVSCSV-IESK-KTVMEGWVKVMVP-
General information:
TITO was launched using:
RESULT:
Template:
3IR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53032 for 803 contacts (-66.0/contact) +
2D Compatibility (PS) -13323 + (NN) -3780 + (LL) 1640
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -75895.0 ( -94.51 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_3IR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IR3-query.scw
PDB file :
Tito_Scwrl_3IR3.pdb
: