Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQARPARRADVRELSRTMARAFYDDPVMSWLLSNDNARTARLTRLFA-TIVRHQH-LAGGGVEVARGAAGIGGAALWDPPDRWRESRRQQLAMTPGFLRVFGFRTAKARAALDVMMRVHPEEPHWYLAAIGSDPTVRGQGFGQVLMRSRLDRCDAEHCP-AYL--ESTKPENVPYYQRFGFRVTREIALPDAGPPLWAMWREPR
1TIQ Chain:A ((2-155))
-SVKMKKCSREDLQTLQQLSIETFNDT--FKEQNSP-ENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQS---------------------------------EEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSF---------------
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45232 for 1019 contacts (-44.4/contact) +
2D Compatibility (PS) -15152 + (NN) -2405 + (LL) 3840
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -63999.0 ( -62.81 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: