Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKD-MVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANE--INEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGV-----LKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKSLTH |
| 3QM3 Chain:A ((13-357)) | -GVISGDELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILHTDHAARKLL-PWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIELGCTGG-----DNTGIDNSKLYTQPEDVALAYERLGKISD-KFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFAL-NSDKPINFVFHGGSGSELKDIKNAVSYGVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGEESMIKRLEIAFEDLNCINKN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153547 for 2847 contacts (-53.9/contact) +
2D Compatibility (PS) -36444 + (NN) -17472 + (LL) 244
1D Compatibility (HY) -24400 + (ID) 6750
Total energy: -238369.0 ( -83.73 by residue)
QMean score : 0.519
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