Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSTVLVINSGSSSLKFQLVEPVAGMSRAAGIVERIGERSS--------PV----ADHAQALHR-AFKMLAEDGIDLQTCGLVAVGHRVVHGGTEFHQPTLLDDTVIGKLEELSALAPLHNPPAVLGIKVARRLLANVAHVAVFDTAFFHDLPPAAATYAIDRDVADRWHIRRYGFHGTSHQYVSERAAAFLGRPLDGLNQIVLHLGNGASASAIARGRPVETSMGLTPLEGLVMGTRSGDLDPGVISYLWRTARMGVEDIESMLNHRSGMLGLAG-ERDFRRLRLVIETGDRSAQLAYEVFIHRLRKYLGAYLAVLGHTDVVSFTAGIGENDAAVRRDALAGLQGLGIALDQDRNLGPG-HGARRISSDDSPIAVLVVPTNEELAIARDCLRVLGGRRA |
4XH1 Chain:A ((21-411)) | ----VLVINCGSSSIKFSVLDVATCDVLMAGIADGM-TENAFLSINGDKPINLAHSNYEDALKAIAFELEKRDLTD----SVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKDSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIH-LGNVKA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -222685 for 3146 contacts (-70.8/contact) +
2D Compatibility (PS) -40831 + (NN) -18337 + (LL) 628
1D Compatibility (HY) -27200 + (ID) 7800
Total energy: -316225.0 ( -100.52 by residue)
QMean score : 0.578
|
|
|