Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------MTMPLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLA-GCPECRGAVT----ELCGVPALLSQLDRDEVAAISESAPTVVASGL-------SPELLPSLLAA------VHRRRR----RTRLITWVASSAAAAVLAIGVLV--GVQGHSAAPQRAAVSALPMAQVGTQLL----ASTVSISGEP---WGTFINLRCVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAADTGQVLLQRSL |
| 4BFA Chain:A ((22-338)) | ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGS------WGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGL--------YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74389 for 1641 contacts (-45.3/contact) +
2D Compatibility (PS) -24279 + (NN) -3405 + (LL) 1472
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -108351.0 ( -66.03 by residue)
QMean score : 0.104
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