Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRHWPLFDLRITTPRLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVAR---EGAMAEALLFRLTRDDWQ-RHRTVEVRVDGFDRCRPLFGPLEPPRY
2Z10 Chain:A ((4-185))
-------FPERFEGRHVRLEPLALAHLPAFLRHY-----DPEVYRFLSRAPVAPTEEALRAHLEGLL-------GEPGRVNWAILFGKEVAGRISVIAPE-PEHAKLELGTMLFKPFWGSPANKEAK-LLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKEEWPGVKARLEA--------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57255 for 1317 contacts (-43.5/contact) +
2D Compatibility (PS) -18370 + (NN) -6506 + (LL) 2124
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -86857.0 ( -65.95 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2Z10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z10-query.scw
PDB file :
Tito_Scwrl_2Z10.pdb
: