Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSSGAGSDATGAGGVHAAGSGDRAV---AAAVERAKATAARNI----PAFD---DLPVPADTANLREGADLNNALLALLPL----------------------------------VGVWRGEGEGRGPDGDYRF---GQQIVVS--HDGGDYLNWESRS----------WRLTATGDYQEPG-----LR------EAGFWRFVADPYDPSESQAIELLLAHSAGYV-----ELFYGRPRTQSSWELV--TDALARSRSGVLVGGAKRLYGIVEGGDLAYVEE--------------RVDADGGLVPHLSARLSRFVG---- |
| 4LDV Chain:A ((16-356)) | SDALCRELWHACAGPL-VTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAETDEVYAQITLLPELDQSEPTSPDAPVQETVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMPSSVISSHSMHIGVLATAAHAITTGTIFSVFY-KPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14442 for 1340 contacts (-10.8/contact) +
2D Compatibility (PS) -23120 + (NN) -136 + (LL) -344
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -48092.0 ( -35.89 by residue)
QMean score : 0.053
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