Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA
4DAF Chain:A ((37-293))--------------------------------------NEKTLIMGILN----------SYNEVDAAVRHA-KEMRDEGAHIIDIG----------SVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------


General information:
TITO was launched using:
RESULT:

Template: 4DAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163394 for 1970 contacts (-82.9/contact) +
2D Compatibility (PS) -26323 + (NN) -14258 + (LL) 1980
1D Compatibility (HY) -20800 + (ID) 4150
Total energy: -226945.0 ( -115.20 by residue)
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_4DAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DAF-query.scw
PDB file : Tito_Scwrl_4DAF.pdb: