Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVYTSATHWGVFTARVHGGDIAAVAALASDTNPAPQLQNLPGAVRHRSRIANPAVRRGWLQHGPGP-SSARGAEEFVEVSWDELIELLASELRRTVDRYGNEAIYGSSYGWASAGRFHHAQSQVHRFLNMLGG--YTASRHSYSAGASEVIFPHIVGAALFEALAET-----TTW-DVIVDHTALLVAFGGLPVKNTAVMPGGTTAHPDR--DYVGRY-RARGGRLVSVSPLRDDIAA-IAGPLDDRCRWLAPVPGTDVAIMLGLAYVLATESLADRAFLGRYCTGYERFERYLLGLDDGIPKTPEWAAALSGLAAGDLRDLARRM-AEHRTLITTSLSLQRIEHGEQTVWMAATLAAMLGQIGLPGGGFGHGYSSNGVGN-PPLA----CGLPALP---QGNNPVSTFIPVAAISELLQRPGQRLAYNG----------R-LLELPDIKCVYWAGGNPFHHHQNLPRLRRALSRVDTIVVHEQYWTAMAKHADIVVPTTTSFERDDFAA---SKTNPTLIAMPAMVPPYANARDDYHTFSALAHRLGFGKQFTEGRSAREWLEHMYDKWSAELD-----FPVPSFAEFWRTGRLELPTRTGLTWLADFRADPAAHPLGTPSGRIEIFSDTVDAFALPDCAGHPTWYEPSEWLG-GPRAARYPLHLIANQPRTRLHSQLDHG-GASMASKIRGREPIRIHPDDAAARELTDGDIVRVFNDRGACLAGVVIDDGLRPKVVQLSTGAWFDPADPRDP-------DSMCVHGNPNALSNDSGTSSLAHGSTGQHVL-VQIERFTGELPPVRAHEPPRLA |
| 1TMO Chain:A ((40-824)) | --WLTTGSHFGAFKMKRKNGVIAEVKPFDLDKYPTDMINGIRGMVYNPSRVRYPMVRLDFLLKGHKSNTHQRGDFRFVRVTWDKALTLFKHSLDEVQTQYGPSGLHAGQTGWR-ATG-QLHSST-SHMQRAVGMHGNYVK-----KIGDYSTGAGQTILP--YVLGSTEVYAQGTSWPLILEHSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLG------CEQLYVNPQTDVTLMLAIAHEMISKKLYDDKFIQGYSLGFEEFVPYVMGTKDGVAKTPEWAAPICGVEAHVIRDLAKTLVKG-RTQFMMGWCIQRQQHGEQPYWMAAVLATMIGQIGLPGGGISYGHH-YSSIGVPSSGAAAPGAFPRNLDENQKPLFDSSDFKGASS---TIPVARWIDAILEPGKTIDANGSKVVYPD-IKMMIFSGNNPWNHHQDRNRMKQAFHKLECVVTVDVNWTATCRFSDIVLPACTTYERNDIDVYGAYAN-RGILAMQKMVEPLFDSLSDFEIFTRFAAVLGKEKEYTRNMG--E-MEWLETLYNECKAANAGKFEMPDFATFWKQGYVHFGDGEVWTRHADFRNDPEINPLGTPSGLIEIFSRKIDQFGYDDCKGHPTWMEKTERSHGGPGSDKHPIWLQSCHPDKRLHSQMCESREYRETYAVNGREPVYISPVDAKARGIKDGDIVRVFNDRGQLLAGAVVSDNFPKGIVRIHEGAWYGPVGKDGSTEGGAEVGALCSYGDPNTLTLD-IGTSKLAQACSAYTCLVEFEKYQGKVPKVSSFDGP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270031 for 6235 contacts (-43.3/contact) +
2D Compatibility (PS) -79143 + (NN) -43130 + (LL) 1828
1D Compatibility (HY) -42000 + (ID) 12050
Total energy: -444526.0 ( -71.30 by residue)
QMean score : 0.454
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