Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDAVRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLE-------------PGYGLRIGYFAQEHDTLDNDATVWENVRHAAPDAG---EQDLRGLLGAFMFTGPQLEQPAG----TLSGGEKTRLALAGLVASTANVLLLDEPTNNLDPASREQV----LDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA |
| 3FVQ Chain:B ((10-198)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQE-GVLFPHLTVYRNIAYGLGNGKGRTAQERQRIEAMLELTG--ISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHD---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82685 for 1149 contacts (-72.0/contact) +
2D Compatibility (PS) -18381 + (NN) -15506 + (LL) 26188
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -105584.0 ( -91.89 by residue)
QMean score : 0.492
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