Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLYLGYRNDDADTPFGKFF--KPEMAPLPQHVVVALQHGPQA-GMALLAFDDAASIVDEGYQQT---------------------ENGYGILGDGSMQVSVRTDMPGVTP-------AMWAWWFGWH---GSDTRRY----KLWHPRAHLSARWKDGDQDSGAGR------------RGAQRYVGRWSMISEYIGSTKLGAAIQ----------FVEPAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVR-----PIASKLI-----GVSESTARNLLVYCAQEMN-HLAGFLADLWESFGDE---------------------------------- |
| 4YLA Chain:A ((2-375)) | -AGDPFVDNGTVSSQRPLRAVPGRYPPGATHLDAAVDTLVRCHAALGRAPSEAEAAVCLLRRLWGRWGNTPVERPGWRSYVAVDGSPFELSAAWNGDGPAEVRVTVEATADPPTPEGNQEAGWEYLRGLSRHPGAATARVLALEDLFRPQTPHDRCWIMHGMASRPGADPLFKVYLDPDARGAAEAPSVLDEAMDRLGVRAAWQGLRGWLDEHGGSGRIGSLALDLADTDDARVKVYVQHAGLD-WADIDRQAAVARGHVPGAFSAALEEITGTEVPPHKPP-VTCFAFHRGVGVPTAATLYIPMPAGVPESDARRRSAAFMRRSGLDSAAYLAFLAAATGDGEGVRALQNFVAYRPAAPGGRPRFACYVAPGLYRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43330 for 1794 contacts (-24.2/contact) +
2D Compatibility (PS) -28392 + (NN) -6795 + (LL) 456
1D Compatibility (HY) 2000 + (ID) 3100
Total energy: -79161.0 ( -44.13 by residue)
QMean score : 0.161
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