Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRSPKGSPGAVLDLQRRVDQAVSADHAELMTIAKDANTFFGAESVQDPYPLYERMRAAGSVHRIAN---SDFYAVCGWDAVNEAIGRPEDFSSNLTATMTYTAEGTAKPFEMDPLGGPTHVLATADDPAHAVHRKLVLRHLAAKRIRVMEQFTVQAADRLWVDGM---QDGCIEWMGAMANRLPMMVVAELIGLPDPDIAQLVKWGYAATQLLEGLVENDQLVAAGVALMELSGYIFEQFDRAAADPRDNLLGELA-TACASGELDTLTAQVMMV-TLFAAGGESTAALLGSAVWILATRPDIQQQVRANPELLGAFIEETLRYEPPFRG-HYRHVRNATTLDGTELPADSHLLLLWGAANRDPAQFEAPGEFRLDRAGGKGHISFGKGAHFCVGAALARLEARIVLRLLLDRTSVIEAADVGG----WLPSILVRRIERLELAVQ |
| 4BF4 Chain:D ((40-423)) | ----------------------------------------LGQDFAADPYPTYARLRAEGPAHRVRTPEGNEVWLVVGYDRARAVLADPR-FSKDWRNSTTPLTEAEA---------ALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGL-VDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVW-------TDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDI-RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL-ALDVSPGELVWYPNPMIRGLKALPI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245353 for 3038 contacts (-80.8/contact) +
2D Compatibility (PS) -40460 + (NN) -24141 + (LL) 3924
1D Compatibility (HY) -22800 + (ID) 6600
Total energy: -335430.0 ( -110.41 by residue)
QMean score : 0.489
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