Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MVLSRTSTGRVILVP----TQLRFDRWFLPLAVPLGLGPKNSELWV--GAGSLHVKMGWAFAA-DIPLTSITKAEATNARVYAAGVHFGFG-RWLVNGSRK--------GLVALTIDPPEQAKMWKKSMTVR------ELW------VSVTDPDALVTACTAK---- |
| 1D4O Chain:A ((5-181)) | GTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75010 for 1028 contacts (-73.0/contact) +
2D Compatibility (PS) -14107 + (NN) -908 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -98375.0 ( -95.70 by residue)
QMean score : 0.128
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