Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MADRVLRGSRLGAVSYETDRNHDLAPRQ------IARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIE------ELEELLKERLELIRSRRRG-------------------------
1J0S Chain:A ((1-157))
YFGKLESKLSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDNAPRTIFIISMYKDSQPRGMAVTISVKCEKISTLSCENKI-ISFKEMNPPDN----IKDTKSDIIFFQRSVPGHDNKMQFESSSYEGYFLACEKERDLFKLILKKEDELGDRSIMFTVQNED
General information:
TITO was launched using:
RESULT:
Template:
1J0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11046 for 603 contacts (-18.3/contact) +
2D Compatibility (PS) -11002 + (NN) -2189 + (LL) 488
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -29249.0 ( -48.51 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1J0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J0S-query.scw
PDB file :
Tito_Scwrl_1J0S.pdb
: