Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSHCSH------TFITDN--------RSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDRAPSRGYARPRFDDDYGRYDGRDYDDARSDSRGDLRGEPADYPPPGYRGGYADEPRFRPREFDRAEMTRPRFGSWLRNSTRGALAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDG----SPV-----IMDLVSMDN----------------------------ADAKRLVDFAAG----------LAFALRGSFDKVATKVFLLSP--ADVDVSPEERRRIAETGFYAYQ---------------------------------------------------------- |
| 4TN3 Chain:A ((27-400)) | -VDHCARHGEKLLLFCQEDSKVICWLCKDSQEHRGHHTFLMEEVAQEYHVKLQTALEMLRQKQQEAEKLEADIREEKASWKIQ-IDYDKTNVSADFEQLREILDWEESNELQNLEKEEEDILKSLTKSETEMVQQTQYMRELIS-ELEHRLQMMDLLQGVDGIIKRIENMTLFRAPDLKGMLDMFRDAAAEESPVLLAMNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11307 for 1066 contacts (10.6/contact) +
2D Compatibility (PS) -24651 + (NN) 11306 + (LL) -136
1D Compatibility (HY) -4000 + (ID) 2100
Total energy: -8274.0 ( -7.76 by residue)
QMean score : ?
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