Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRR--AGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
2VZ4 Chain:A ((1-52))
----------------------------SYSVGQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDR-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35259 for 270 contacts (-130.6/contact) +
2D Compatibility (PS) -4889 + (NN) 74 + (LL) 4952
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -37322.0 ( -138.23 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2VZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VZ4-query.scw
PDB file :
Tito_Scwrl_2VZ4.pdb
: