Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL-ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P----------PGSTVRHLLAHTSGLAMHSD-------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGG---------------------------PAAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNSTRTFGHFGQS---GGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 4E6W Chain:A ((6-332)) | -LIHQRMQEAKVPALSVSVTIKGVRQRFVYGVADVASQKANTLDTVYELGSMSKAFTGLVVQILIQEGRLRQGDDIITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEAVAQQLRNENLLFAPGAKFSYASANYDVLGAVIENVTGKTFTEVIAERLTQPLGMSATVAVKGDEIIVNKASGYKLGFGKPVLFHAPLARNHVPAAYIHSTLPDMEIWIDAWLHRKALPATLREAMSNSWRGNSDV---PLAADNRILYASGWFIDQN----------QGPYISHGGQNPNFSSCIALRPDQQIGIVALANMNSNL-ILQLCADIDNYLRI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4E6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142809 for 2126 contacts (-67.2/contact) +
2D Compatibility (PS) -27104 + (NN) -9243 + (LL) 896
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -191760.0 ( -90.20 by residue)
QMean score : 0.393
|
|
|