Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIEPQHAVNIV----LKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSA---FV------GSVVSAEVDPSVLPGLVVSSQDAAR-SAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVST-TFLASSTGLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRT--------VELPAGRYQTIMPP----STVADMMIYLGWSMAGRGAQ--EGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAADNLIMTGGSADLADM---IAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNN---FRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 4UOX Chain:A ((7-459)) | SASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAAL-------TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGK---SLGALSATAKSTFRKPFMPL-LPGFRHVPFG-NIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRT------GKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVL------VAGTLNNAKTIRI-EPPL--------------TLTIEQCELVIKAARKALAAMRVSVEEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77159 for 3427 contacts (-22.5/contact) +
2D Compatibility (PS) -43513 + (NN) -4813 + (LL) 1888
1D Compatibility (HY) -8400 + (ID) 4150
Total energy: -136147.0 ( -39.73 by residue)
QMean score : 0.171
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