Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVALRGLGWWADVDIERALAIGT-DMSMRLADRGVLLKDTYGAALRFAPPLVITAQEIDCAVRRFADALWEAGS
1OAT Chain:B ((260-430))
FIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIE-----------
General information:
TITO was launched using:
RESULT:
Template:
1OAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87641 for 1124 contacts (-78.0/contact) +
2D Compatibility (PS) -18012 + (NN) -5065 + (LL) 824
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -126994.0 ( -112.98 by residue)
QMean score : 0.178
(partial model without unconserved sides chains):
PDB file :
Tito_1OAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OAT-query.scw
PDB file :
Tito_Scwrl_1OAT.pdb
: