Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPL-PPGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSE--IVPAAAVPTLVDMSKDAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQPARQLVQRS--EEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARESLT |
3LOQ Chain:A ((20-292)) | ----FQSNAMLLPTDLSENSFKVLEYLGDFKKVGVEEIGVLFVINLTKL-----GIDIDHYIDEMSEKAEEVLPEVAQKIEAA-----GIKAEVIKPFPAGDPVVEIIKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFKHDMVV--NSLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKT-A-------D----L----RVMEEVIGA-EGIEVHVHIESGTPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFVCKRGD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156794 for 2215 contacts (-70.8/contact) +
2D Compatibility (PS) -29059 + (NN) -12816 + (LL) 2248
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -211171.0 ( -95.34 by residue)
QMean score : 0.526
|
|
|