Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPG-TGPDAPTCPKAFATFGELTQLAGVF--GFADCIDLLANYTALCIDEFELDDPGNTTLISRLL-SALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 2QGZ Chain:A ((104-300)) | ----------------------------------AISERIQLVSLPKSYRHIHLSDIDVNN--ASRMEAFSAILDFVEQYP--------------SAEQKGLYLYGDMGIGKSYLLAAMAHELSEKK-----GVSTTLLHFPSFAIDVKNAIS--KEEIDAVKNVPVLILDDIGA----VRDEVLQVILQYRMLEELPTFFTSNYSFADLERK-WA-WQAKRVMERVRYLAREFHLEGANRR----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119745 for 1361 contacts (-88.0/contact) +
2D Compatibility (PS) -18107 + (NN) -7053 + (LL) 12524
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -141281.0 ( -103.81 by residue)
QMean score : 0.362
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