Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGIA-----MMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPMINNE----FFQQWL-TTADMDAPHNLGNALPVELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR |
| 3T7C Chain:D ((26-299)) | -----VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--GAENIGN--YIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFR---PTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176815 for 2239 contacts (-79.0/contact) +
2D Compatibility (PS) -27036 + (NN) -5496 + (LL) 884
1D Compatibility (HY) -24800 + (ID) 6700
Total energy: -239963.0 ( -107.17 by residue)
QMean score : 0.494
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