Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPN------GVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKR------WLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL |
3GWM Chain:A ((3-125)) | ------------------------------------------------------------------------------------------------------------VGVGIDLVSIPDFAEQVDRPGTVFAETFTPGERRDAADKSSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHRDIEVVTDMW-----GRPKVRLSGEIA--KHLEDVTIHVSLTHEDQTAAAVAI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31004 for 816 contacts (-38.0/contact) +
2D Compatibility (PS) -11886 + (NN) -5298 + (LL) 6708
1D Compatibility (HY) 5200 + (ID) 1150
Total energy: -37430.0 ( -45.87 by residue)
QMean score : 0.243
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