Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
4R0N Chain:C ((1-156))
-TGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN----
General information:
TITO was launched using:
RESULT:
Template:
4R0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118832 for 1218 contacts (-97.6/contact) +
2D Compatibility (PS) -17227 + (NN) -11727 + (LL) 516
1D Compatibility (HY) -23200 + (ID) 7800
Total energy: -178270.0 ( -146.36 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_4R0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R0N-query.scw
PDB file :
Tito_Scwrl_4R0N.pdb
: