Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGSELTVSGRI---EPGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGT-G---LPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP-VAARRWDIEPDLTNAVAFLSAAVVSG-GTVRITGWPRVSVQPADHILAILRQLNAVVIHADS-------SLEVRGPTGYDGFDVDLRAV---GELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLR-PGIWRAYADHRMAMAGAIIGL-RV-AGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 1RF6 Chain:A ((4-426)) | ------KTNIRHLHGIIRVPGDKSISHRSIIFGSLA----EGETKVYDILRGEDVLSTMQVFRDLGVEIEDKDGVITVQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPI-ASAQVKSALMFAALQAKGESVIIE----KE--YTRNHTEDMLQQFGGHLSVD-GKKITVQGPQKLTGQKVVVPGDISSAAFWLVAGLIAPNSRLVLQNVGINET--RTGIIDVIRAMGGKLEITEIDPVAKSATLIVESS-DLKGTEICGALIPRLIDELPIIALLATQAQ--GVTVIKDAEELKVKETDRIQVVADALNSMGADITPTADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDDLESLIH-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283141 for 3732 contacts (-75.9/contact) +
2D Compatibility (PS) -43703 + (NN) -27870 + (LL) 20
1D Compatibility (HY) -24800 + (ID) 4400
Total energy: -383894.0 ( -102.87 by residue)
QMean score : 0.481
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