Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLVSEKEFLDLPLVSVAEIVRCRGPKVSVFPFDGTRRWFHLECNPQYDDYQQAALRQSIRILKMLFEHGIETVISPIFSDDLLDRGDRYIVQALEGMALLANDEEILSFYKEHEVHVLFYGDYKKRLPSTAQGAAVVKSFDDLTISTSSNTEHRLCFGVFGN------DAAESVAQFSISWNETHGKPPTRREIIEGYYGEYVDKADMFIGFGR-FSTFDFPLLSSGKTSLYFTVAPSYYMTETTLRRILYDHIYLRHFRPKPDYSAMSADQLNVLRNRYRAQPDRVFGVGCVHDGIWFAEG |
2VG3 Chain:A ((52-275)) | ---------------------ADRLPNHVAIVMDGNGRWATQRGLARTEGHK-MGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRR--RDTLKKLGVRIRWVGSRPRL------WRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREIAREVAAG-RLNPERITESTIARHLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99717 for 1714 contacts (-58.2/contact) +
2D Compatibility (PS) -24470 + (NN) -16462 + (LL) 5492
1D Compatibility (HY) 800 + (ID) 1600
Total energy: -135957.0 ( -79.32 by residue)
QMean score : 0.480
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