Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDAT--RRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQM--------SCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVA-NADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
1RQI Chain:A ((45-267)) | --------------------------------------------------------------------GKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDR--DRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100925 for 1695 contacts (-59.5/contact) +
2D Compatibility (PS) -23003 + (NN) -16404 + (LL) 10344
1D Compatibility (HY) -9600 + (ID) 3750
Total energy: -143338.0 ( -84.57 by residue)
QMean score : 0.307
|
|
|