Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGF-RAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1OI6 Chain:B ((1-194))
MQARKLAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEAQRQGLLPDYTTSQEI-------
General information:
TITO was launched using:
RESULT:
Template:
1OI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102981 for 1597 contacts (-64.5/contact) +
2D Compatibility (PS) -20527 + (NN) -9328 + (LL) 404
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -152982.0 ( -95.79 by residue)
QMean score : 0.799
(partial model without unconserved sides chains):
PDB file :
Tito_1OI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI6-query.scw
PDB file :
Tito_Scwrl_1OI6.pdb
: