Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVLPACRLGLVVCVATAVITATMVLATPSYACACGAAVTAHGSQATLNHEVALLHWDGTTETIVMQLAMNADTDNVALVVPTPTPAIVTTADQSTFGELDTLSAPLIEHQRHWSLRRGVGASGPQEAAARAPHVLNQVRLGPLEATTLTGGDLSGLQTWLSDNGYAIRPAVSAALDPYVRDGWAFVAIRLTSTDLIVGGLDPVRMTFRSSRLVYPMRLSVAAQEPQHVTIFTLSDHRQQRTDADAATQTTHVRFAGDMSTAVRDPLLRELIGNHGSYLTKVEVDIYQTSRISSDFTFGNAPNDDPYRQVVTVYDDVALPPLLLVVVSAIAVGAAGGAVVVVLRRRRRAHTG |
3K7U Chain:C ((21-134)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVNSVTLVGVVHDIQSGFVYEDAVTQFTLTTTSIEKDHHTIRCFGELFSAEVKQKVKE--------GNVVCVNGRLRLSPQLEPSYFPYIQVQPPHGQVAVIHGDR-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21202 for 659 contacts (-32.2/contact) +
2D Compatibility (PS) -10538 + (NN) -1223 + (LL) 18336
1D Compatibility (HY) 0 + (ID) 750
Total energy: -15377.0 ( -23.33 by residue)
QMean score : 0.220
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