Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGTIQVVIGPAMHAEGEGPRAIAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
1QF6 Chain:A ((63-242)) | KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDR---------------TLTQEDVEALEKRMHELAEKN-------------YDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE--------YVDMCRGPHVPNMRF---------------CHHFKLMKTAGAYWRGD---SNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126085 for 1343 contacts (-93.9/contact) +
2D Compatibility (PS) -18520 + (NN) 1581 + (LL) 3868
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -143256.0 ( -106.67 by residue)
QMean score : 0.272
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