Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNP-TQAALGFAKKCG-VDLQQIDKSGPKLRFIQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWLVMLFG------DDVVECEILAQKAGRESRGHRFHNPDNVRIS-------SPAAYLEDLRGAHVLADFAER----RELIAKRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVANVESKAPENIVSGN---EKVVRPRLTDAEFFFKQDKKQPLESFNERLRNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALAL---------NEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPY--ALRRAALGVLRILIEKQLDLDLVAAVNAAVEQY----GDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPS--------SPLDFDQRVQAV---QAFRQLPEAEALAAANKRVSNILAKSEDEVPPNV----------DASLLVEAAEKALGSAVANAESEVAPLAAARDYRAALARLAALREPVDTFFADV-------------MVNVDDAAVRANRYALLAKLR---GSFLGV-----ADISLLG--------------------------------------- |
4BQ2 Chain:A ((2-747)) | ---SHMLFDFENDQVPSN-IHFLN--ARASIETYTGINGEPSKGLKLAMQSKQHSYTGLAIVPEQPWDWSEFTSASLYFDIVSVGDHSTQFYLDVTDQNGAVFTRSIDIPVGKM---QSYYAKLSGHDLEVPDSGDVNDLNLASGLR--SNPPTWTSDDRQFVWMWGVKNLDLSGIAKISLSVQSAMHD----KTVIIDNIRIQPNPPQDENFLVGLVDEFGQNAKVDYKGKIHSLEELHAARDVELAELDGK----PMPSRSKFGGWLAGP------------KLKATGYFRTEKIN-GKWMLVDPEGY--PYFATGLDIIRLSNSSTMTGYDYDQATVAQRSADDVTPEDSKGLMAVSEKSFATRHLASPTRAAMFNWLPDYDHPLANHYNYRRSAHSGPLKRGEAYS--FYSANLERKYGE--TYPGSYLDKWREVTVDRMLNWGFTSLGNWTDPAYYDNN---RIPFFANGWVIGDFKTVSSGADFWG--AMP----DVFDPEFKVRAMETARVVSEEIKNSPWCVGVFIDNEKSFGRPDSDKAQYGIPIHTLGRPSEGVPTRQAFSKLLKAKYKTIAALNNAWGLKLSSWAEFDLGVDVKALPVTDTLRADYSMLLSAYADQYFKVVHGAVEHYMPNHLYLGARFPDWGMPMEVVKAAAKYADVVSYNSYKEGLP-------KQKWAFLAELDKP--SIIGEFHIGAMDHGSYHPGLIHAASQADRGEMYKDYMQSVIDNPYFVGAHWFQYMDSPLTGRAYDGENYNVGFVDVTDTPYQEMVDAAKEVNAKIYTERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4654 for 4907 contacts (-0.9/contact) +
2D Compatibility (PS) -64453 + (NN) -1886 + (LL) 4928
1D Compatibility (HY) -11200 + (ID) 5650
Total energy: -82915.0 ( -16.90 by residue)
QMean score : 0.135
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