Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1LRU Chain:C ((1-161))-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL-----


General information:
TITO was launched using:
RESULT:

Template: 1LRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78175 for 1248 contacts (-62.6/contact) +
2D Compatibility (PS) -17092 + (NN) -5389 + (LL) 856
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -123200.0 ( -98.72 by residue)
QMean score : 0.706

(partial model without unconserved sides chains):
PDB file : Tito_1LRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LRU-query.scw
PDB file : Tito_Scwrl_1LRU.pdb: