Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MFMKKLMLAVGLFAVAGSAF-AAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDK-----KVVGTCDGGTKEIVYQRG----------
2CO5 Chain:A ((5-96))
KYMRINYYIILKVLVINGSRLEKKRLRSEILKRFDIDISDGVLYPLIDSLIDDKILREEEAPDGKVLFLTEKGMKEFEELHEFFKKIVCHHH
General information:
TITO was launched using:
RESULT:
Template:
2CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32281 for 513 contacts (-62.9/contact) +
2D Compatibility (PS) -7859 + (NN) -859 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 550
Total energy: -47549.0 ( -92.69 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CO5-query.scw
PDB file :
Tito_Scwrl_2CO5.pdb
: