Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
1RMK Chain:A ((7-19))
------------------------------EYCIVPILGFVYCCPG
General information:
TITO was launched using:
RESULT:
Template:
1RMK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130 for 39 contacts (-3.3/contact) +
2D Compatibility (PS) -1363 + (NN) -1138 + (LL) 2824
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -2057.0 ( -52.74 by residue)
QMean score : 0.850
(partial model without unconserved sides chains):
PDB file :
Tito_1RMK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RMK-query.scw
PDB file :
Tito_Scwrl_1RMK.pdb
: