Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRPLTRLVPLALLLLAGCAGPLPQPD-PQMAWV-ELRSAPANTLLAERLDG---ERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQI-NCYQQVVYDGFEAGRRYRLEVR------PQLRRALALLSDERGEVVAR-SNFQTSRC-PPY--------------------------- |
| 4OO2 Chain:A ((18-527)) | TRPLTGEEYLESLRDAREVYLDGSRVKDVTAHPAFHNPARMTARLYDSLHDPAQKAVLTAPTDAGDGFTHRFFTAPRSVDDLVKDQAAIASWARKSYGWMGRSPDYKASFLGTLGANADFYEPFADNARRWYRESQEKVLYWNHAFLHPPVDRSEVGDVFIHVERETDAGLVVSGAKVVATGSALTHAAFISHWGLPIKDRKFALVATVPMDADGLKVICRPSYSANAATTGSPFDNPLSSRLDENDAILVLDQVLIPWENVFVYGNLGKVHLLAGQSGMIERATFHGCTRLAVKLEFIAGLLAKALDITGAKDFRGVQTRLGEVLAWRNLFWSLSDAAARNPVPWKNGTLL-------PNPQAGMA-YRWFMQIGYPRVLEIVQQDVASGLMYVNSSTEDFRNPETGPYLEKYLR-------GSDGAGAVERVKVMKLLWDAV--GSDFGGRHELYERNYSGNHENTRIELLLSQTASGKLDSYMDFAQA--CMDEYDLDGWTAPDLESFHAMRSASRDLLGGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15231 for 637 contacts (-23.9/contact) +
2D Compatibility (PS) -13801 + (NN) -3405 + (LL) 652
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -36035.0 ( -56.57 by residue)
QMean score : 0.110
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