Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNV-FATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFY------LRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLAS--RARLEALYA-----GPLD--DAAKRAGKAA-EFQRLRREYAALSQREWGGESPFKA-WIDAPFNNAKLLPFGLYDQWVAAFAVLFRQ-VGGN---W-PAFYARVRALGQLPLAERQAALQRLAAAAP |
| 2XQ0 Chain:A ((202-462)) | ----------------------------------------------IPAYLIGIASGDLSSAPIGPRST-VYTEPFRLKDC-----------QWEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESP----NMTFAT-----------PTL---------------------LA----------HDRSNIDVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTR--HFSA-LIGWSDLQNSIDSMKDPERFSTLVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKA-EFDPFIRHYFKKFAKK---S----------LDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPPRPHFITALADNVYQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22013 for 1767 contacts (-12.5/contact) +
2D Compatibility (PS) -24814 + (NN) -4977 + (LL) 8712
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -48792.0 ( -27.61 by residue)
QMean score : 0.099
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