Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVDM-FIKIGDVKGESKDKTHAEEIDVLAWSWG-MSQSG-SMHMG-GGGGAGKVNVQDLSFTKYIDKSTPNLMM-ACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA |
| 1Y12 Chain:A ((2-162)) | --AVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMH----MGGGGAGKVNVQDLSFTKYIDKSTPNLM-MACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 47318 for 986 contacts (48.0/contact) +
2D Compatibility (PS) -14633 + (NN) 4906 + (LL) 848
1D Compatibility (HY) 10800 + (ID) 550
Total energy: 48689.0 ( 49.38 by residue)
QMean score : -0.053
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