Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGEWL-L--------AASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDC-----TELPLLLCVAEGDRPG---------------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLL-------------TSQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDG-------------------------PNVFCHLGNDAGERAAALLSYRRVRAA |
| 2VBA Chain:A ((1-404)) | -MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLID-RKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP----SGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182659 for 3122 contacts (-58.5/contact) +
2D Compatibility (PS) -34731 + (NN) -10690 + (LL) 1552
1D Compatibility (HY) -1600 + (ID) 2250
Total energy: -230378.0 ( -73.79 by residue)
QMean score : 0.467
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