Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSAT-VVHEPVEQALFLGARGQVFCM-GSGDIHEEQLPDGDDAIGGRGNMRGVACID-G------VAYACGMDRQVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRNDHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVY-TLVGGHLKEVDFGDEQPQRCFHLSAADGVLWSIAAKDIFS-FDGQQWTRID- |
| 3NO2 Chain:A ((3-276)) | -----SPQHLLVGGS----GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSK-GAKMITRDGRELWNIAAPAG---CEMQTARI----LPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER------PHAQFRQINKNKK----GNYLVPL-----FATSEVREIAPNGQLLNSVKLSGTP--------FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKG-KHPQ-LVEIDSEGKVVWQLNDKVKFGMIS--TICPIRE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104198 for 2157 contacts (-48.3/contact) +
2D Compatibility (PS) -27593 + (NN) -8938 + (LL) 3096
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -150283.0 ( -69.67 by residue)
QMean score : 0.203
|
|
|