Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSDAKVDTR--RLVGRLLLVTV----LMFAFGFALVPLYDVMCRALGINGK-TAGSAYSGEQQVDVGR-------EVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPSDKPMTAQ---------AIPSIAPAEAAAYFH---------KTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDVRHVTLAYTLFDI---TARKPPVPVAGR |
| 4KKR Chain:A ((9-241)) | VIEANLSLNQNQLASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVGVDTAGRMLNVTRGFWVPEYMADGKYTVSLQVVAENGKVFKANQEFVKGVDLNSLPELNGLTIDIKNQFGINSVESTGGFVPFTVDLNNGREGEANVEFWMTAVGPDGLIIPVNAREKWVIASGDTYSKVRGINFDKSYPAG--EYTINAQVVDIVSGERVEQSMTVVKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84352 for 1108 contacts (-76.1/contact) +
2D Compatibility (PS) -19172 + (NN) 3343 + (LL) 292
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -107089.0 ( -96.65 by residue)
QMean score : 0.177
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