Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV-YLEDDIPHIGMRRA
1Q2Y Chain:A ((1-140))
------MKAVIAKNEEQLKDAFYVREEVFVKEQNVPAEE-EIDELENESEHIVVYDGEKPVGAGRWRMK---DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGAS-GFILNAQTQAVPFYKKHGYRVLSEKEFLDAGIPHLQMMKD
General information:
TITO was launched using:
RESULT:
Template:
1Q2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82947 for 1071 contacts (-77.4/contact) +
2D Compatibility (PS) -15085 + (NN) -3939 + (LL) 1068
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -106553.0 ( -99.49 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1Q2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q2Y-query.scw
PDB file :
Tito_Scwrl_1Q2Y.pdb
: