Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETG--RHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAH-EVVFVETEIK
2OPK Chain:A ((20-109))
------EIFQPLLERKGLKIERIISNGQASPPGFWYDSPQDE-WVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHCD
General information:
TITO was launched using:
RESULT:
Template:
2OPK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29204 for 569 contacts (-51.3/contact) +
2D Compatibility (PS) -9680 + (NN) -2710 + (LL) 280
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -44614.0 ( -78.41 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2OPK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPK-query.scw
PDB file :
Tito_Scwrl_2OPK.pdb
: