Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENV--AEGADAERVIRNLAKDGYGLVFTTSFGYMN--PTAKVARQFPKVTFEHATGYKR-DRNLGTYLSRSYEGRYVGGFLAAKMT-RSHKIGYIASFPI-PEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALID--QGVDVVFQHTDSPA--PIQAAERRG----VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 3BRS Chain:A ((5-258)) | ---------------------------------QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEY-E-IKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKD-AGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVRKSGKIGVISFVKNSKTAMDREEGLKIGLSDDSNKI--EAIYYCDS-NYDKAYDGTVELLTKYPDISVMVGLNQYSATGAARAIKDMSLEAKVKLVCIDSSMEQ--EGIFEAMVVQKPFNIGYLGVEKALKLLKKEYVPKQLDSGCALITKD-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94892 for 2054 contacts (-46.2/contact) +
2D Compatibility (PS) -25707 + (NN) -10908 + (LL) 7272
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -132835.0 ( -64.67 by residue)
QMean score : 0.500
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