Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVEL-LRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVT---VLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR-
1NPP Chain:A ((5-248))------------QVQELEKKWYALQVEPGKENEAKENLLKVLELEGL--------KDLVDEVIVPAEEKVVIRA-------------QGKEKYRLSLKGNA---------------------------------------RDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKP--------GQKITCKEN----KTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPV-MVGGKPVPLKEEEVQNILNQIKRGVKPSKVE-------FEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI


General information:
TITO was launched using:
RESULT:

Template: 1NPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48898 for 1663 contacts (-29.4/contact) +
2D Compatibility (PS) -25284 + (NN) -10175 + (LL) 7048
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -84359.0 ( -50.73 by residue)
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_1NPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NPP-query.scw
PDB file : Tito_Scwrl_1NPP.pdb: