Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIASFGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWSAERTERLSARVMPKRTRAVARDSYREALLLLGVEA--GSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALVREREGFR |
1FPO Chain:A ((2-66)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASG--SQAEQLAAVQQSATINQAWQTLRHPLMRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13197 for 348 contacts (-37.9/contact) +
2D Compatibility (PS) -6953 + (NN) -3749 + (LL) 15416
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -11233.0 ( -32.28 by residue)
QMean score : 0.934
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