Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNV----------MLAATHTHSGPGG----FSHYAMYNL--SVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNANR-NRSLLSHLKNPDIVGYEDGIDPQMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEH-DVSRKSGFVAAFAQTNAGNLSPNL--NLKPGSGPFDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLEEGN----NPFLSALGGLLTGVPP---QELVQCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGV--------RIRRAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPETVATDNDWDTQY-RWERVGISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSFEVLGTTP |
| 4IUW Chain:A ((4-633)) | LPRIQDDLYLAVNGEWQAKTPIPPDK---SVVSADSNLTDDIRQKLVADLSTMTKTAKTLPLQYAARLFAKANDQTRRQQLGIEPVRDRISFLMALTTLDQFRSAMPKLVADQYVLPISPYVDADMHDAEHNILNLGGPDTILPDAAMYNQEDAENAADLAAWSQMAAAMLAAVGF--------SQTDQTAYVEAAKRFDRRLADYVPANVDLAVDSTYDNPLSWQAFEDAAGYL-GIPQAFA---TYMPQTPAKVNAVVPAYLPHLSKLLTPDNYSEWHAWMVINELLTCATYLSDDLRQLAGQYDRFLAGQPEAS-SWTKHAFGIANEYFDDVIGQYYGQTYFGADAKADVTAMVKQILAQYRVQLENNTWLSPATKQKAMRKLATMQVKMGYPARLFSLYDHLSVDVDDDLLTAILKLSAQTQAFWFKQLGQTVDRNQWNMPGHLVNASYDPLKN---DITFPAGILQPPYYSLKWTRAENLGGTGATIGHEISHSFDNNGALY---------DEYGNLHNWWTPADKQAFDQLVKAMAAQFDGR-----------------DYE-GVKVN--------GTLTVSENMADNAGMDVALALLGDQP--DVKDLQAFFITYARSWATKMRPERAKTVLRQDVHAPATLRVNVPVQN-FPAWYQAFNVQPQDGMYRQPQKRLTIWHQ------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 15427 for 4871 contacts (3.2/contact) +
2D Compatibility (PS) -60750 + (NN) 4485 + (LL) 4452
1D Compatibility (HY) -13200 + (ID) 5150
Total energy: -54736.0 ( -11.24 by residue)
QMean score : 0.140
|
|
|