Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MSITSTDICQAADALKGFVGFNRKTGRYIVRFSEDS---FGMDVADDSITPTSEFVW-----SSVRDDVMRLGREQLQILLEQNINERLNIGEPLLVYLRRQDLPEITAQRQLR-----------------------------------
2IZV Chain:A ((17-179))
NLYFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEG-----KPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVR
General information:
TITO was launched using:
RESULT:
Template:
2IZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10489 for 648 contacts (-16.2/contact) +
2D Compatibility (PS) -10861 + (NN) -3634 + (LL) 204
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -28430.0 ( -43.87 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_2IZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IZV-query.scw
PDB file :
Tito_Scwrl_2IZV.pdb
: