Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQFEQGRYYATYENISDTSSGNKLRQQNLLGSYDAFLPIGDNNTKLFGGATLGLVKLEQDGKGFKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
| 1P4T Chain:A ((1-155)) | -------------EGASGFYVQADAAHAKASSSLGSAKGFSP---------------------RISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYIG-----------KVNTVKNVRSGELSAGVRVKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48513 for 1161 contacts (41.8/contact) +
2D Compatibility (PS) -15387 + (NN) 1318 + (LL) 2176
1D Compatibility (HY) -400 + (ID) 1500
Total energy: 34720.0 ( 29.91 by residue)
QMean score : 0.063
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